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Veterinary Anatomy Study Resources: Biosphera

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If you've tried the Biosphera modules, please let us know what you thought of them

About Biosphera

Biosphera is a series of interactive models that explore animal anatomy through fully virtual dissections.  Penn Libraries subscribes to 10 modules:  Bird, Bovine, Cat, Dog, Horse, Pig, Rat, Fish, Frog and Frog Skeleton.

This video shows the basic functions of the interface.

3D Rat Anatomy Video - this video shows someone going through the features of the interactive model

Instructions - getting started

When you open the software, the initial screen will display the whole animal.

Screenshot of Biosphera software showing white rat

 

Screenshot of Biosphera software showing different anatomical systems

 

The buttons on the left menu allow you to control which anatomical systems you wish to view.

The systems have more than one layer. One click and the most superficial layer becomes semi-transparent; another click and it is completely hidden. This allows you to view deeper layers. Each layer button also works as a slider, which allows you to gradually change the visibility of the layers. Just drag the mouse from right to left over the button to see the layers gradually fade away.

Screenshot of Biosphera software buttons

 

The buttons on the right side of the screen allow you to perform a number of functions, detailed in the Right-side Controls section.

Access Biosphera

The modules are housed on some of the computers in our Remote Desktop Lab pool, so that they can be accessed on- and off-campus.  Below are instructions for logging into the RDL.  Additional instructions for off-campus access.

  • Click on Remote lab [green stripe] to see which computers are available
  • To use Biosphera:
    You must select LIB-VPRMT07-WD or LIB-VPRMT08-WD

    The link must show Status: Available  [green shading].
    note: t
    he frog skeleton file is only on 08. 
  • Click the word CONNECT on the right 
  • A popup will come up, click DOWNLOAD.  Ignore warning messages.
  • Once the file has been downloaded double-click it to open a remote connection to the computer
  • Click CONNECT
  • Choose More Choices, then Use a Different Account.  Enter your PennKey followed by @KITE.UPENN.EDU, then your PennKey password.  Checking Remember Me will fill in the KITE account for future sessions.
  • changing login to @KITE.UPENN domain

On the desktop, look for tdesktop shortcut to biosphera moduleshe folder labeled Veterinary Anatomy.

You cannot save files or settings on the Remote Lab PC.  So, be sure to save any work to Google Drive, Box, OneDrive, Canvas or some other cloud storage system.

To disconnect from the remote computer click on the Start menu icon in the lower left corner of the window. Click the word “Power” and then click on “Disconnect

Right-side controls

Right-side controls:

magnifying glass icon Search Opens a search box. Enter the first few letters of a structure name to perform a search through all structures contained in the animal model.
lightbulb icon Background color Switches the background color from light to dark, making it easier to see structures such as bones and ligaments.
gear icon Configuration Opens a settings window that allows you to change the language, text size, rotation speed and touch sensitivity. The “notch” button must be activated on smartphones with a notch on the screen (area that accommodates the front camera and sensors).

layers icon

Remove all layersHides all the structures of the animal model.
arrow icon Anatomical planes → It allows viewing the three main anatomical planes

rotation icon

Auto rotationAllows a more dynamic visualization of the model.

house icon

Home (reset) Returns the animal model go back to the initial settings, as it is presented at the time the app is opened
female icon Female / Male → lets you switch between the female and male reproductive system.
Plus and minus icons Zoom control → Controls the size of the animal model on the screen. 
Move → Move the animal model to the sides, up and down. 
Rotate → Rotates the model. 

Highlighting and Labels

Clicking on any structure will highlighted it (blue) and display a caption in your chosen language. One click on the structure will pin its caption. Click it again to hide the caption.

Screenshot of rat skeleton with mandible highlighted in blue

To select one or more structures, simply click on it. The structure will be highlighted (pink). Selected structures can be hidden by clicking the “remove” button. In this way, organs that are located deeper can be better visualized.

Screenshot with rat skull highlighted in pink

To once again display a hidden structure, just click the “include” button.

Screenshot of rat skeleton

Sometimes we will want only one system to be displayed on the screen. The easiest way to do this is clicking the “remove all layers” button to hide all structures. Then select the system that you wish to be displayed by clicking on the corresponding button (left menu). In the example below, the rat nervous system was selected.

screenshot of rat nervous system

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